Can clear Polycarbonate Plastic Roof Panels be Painted? Yes, clear polycarbonate plastic roof panels can be painted! By selecting the right type of paint and following proper surface preparation, you can customize the appearance of your polycarbonate panels. Acrylic paints work best as they offer good adhesion and flexibility without damaging the material. Begin by thoroughly cleaning the panels, testing the paint's adhesion, and applying it in light, even layers. This process allows you to achieve a stylish upgrade while maintaining the roof's ability to transmit light and resist weather. Keep in mind that UV-resistant paints can also enhance the longevity of the panels.